Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916635.1_cds_XP_016466324.1_59188
CDS Infomation

[gene=LOC107789072] [db_xref=GeneID:107789072] [protein=probable splicing factor 3A subunit 1] [partial=3'] [protein_id=XP_016466324.1] [location=91159..>92646] [gbkey=CDS]
Sequence

ATGTTGAGCACCACGCCAATATTACCCCTTCCAGCGCCCCCGTTGGATGGGAATCTGGGA
CCAACACCTCCAGCGCAGGTGGTAGAGGAACCAAAGGATGATAACATGGAGGAAAATGAA
GAGGACACCAATAAAGCCAATAATGTTTCAACGTCTGTTGCAACACATACTAGAACCATT
GGTATCATTTATCCGCCTCCAGATATTAGGAGTATTGTCGACAAGACTGCACAGTTTGTG
GCGAAGAATGGCCCAGAATTTGAGAAGAGGATTGTTCTAAATAACGCTGGCAATGCAAAA
TTTAACTTCCTGAATGCTTCTGATCCTTACCATGCCTATTATCAGCACCGTTTGGCTGAA
GCTCGTTCACAGAATCAGGCTTCTGGAGAGCAGCCTACTCAACCAGCAGACCAAGAAGCG
GCCCCTGCTCCTCCTACCGCTGATGGTGCTGAGGCAACTGCTAGGCCTGATCCGTCAGTT
CAGTTTAGACCTGTCAGAAGGGTTCTTGAGCCACCTGAGGCAGAGCAATATACTGTTAGA
CTCCCTGAAGGGATCACAGGTGAAGAATTGGATATCATTAAGCTTACAGCACAATTTGTG
GCCAGAAATGGGAAGTCTTTCTTAACAGGGTTGACGAGCAGGGAGATTAATAATCCGCAG
TTTCATTTTCTAAAGCCTACTCACAGCATGTTCATGTTTTTCACTTCACTTGCGGATGCG
TACTCGAAAGTTCTGATGCCTCCTAAAGGCTTGACGGATAAGCTGCGGAAGAGTGCCGCT
GACATGACAACAGTCCTGGAGCGATGTCTGCATCGATTGGAGTGGGAAAAGTCACAGGAG
CAGGCTAGGCAGAAAGCTGAAGATGAGATAGAACAGGAGAGGTTGCAGATGGCTATGATT
GATTGGCATGATTTTGTTGTCGTTGAGACTATAGATTTTGCTGATGATGAGGATCAGGNA
GATCTGGATTTACCTCCACCTATGACCCTTGAGGAGGTTATAAGGAGGAGCAAGATGCCT
ACATTGGAGGAAGAAGAGTATGTTGAGCCCGGAAAAGAGGTGGAAATGGAGATGGATGAA
GAAGAGGTGCAGCTAGTCGAAGAAGGTATGAGAGCTGCGACTCTTCAAGAGAATGGTGAT
GTCAAGAGTGTTGAAACCATGGCAATTCCAGAGGAACAGGACCCACCTATGCGGATTGTG
AAGAACTGGAAGAGGCCTGAAGAGAGGATCCCCGCAGAAAGGGACCCAACTAAGTATGTT
GTCTCTCCTATAACTGGTGAGCTAATACCTATTAATGAAATGTCTGAACATATGAGGATC
TCTCTCATTGATCCGAAGTACAAGGAACAGAAAGACAGGATGTTTGCGAAGATTAAGGAG
ACAACTCTTGCGCAGGATGATGAGATTTCTAGGAACATTGTTGGACTTGCAAGAACCCGT
CCGGATATATTTGGTACTACGGAAGAAGAAGTTTCAAATGCGGTCAAG

Peptide Sequence

PEP ID

XP_016466324.1
PEP Infomation

PREDICTED: probable splicing factor 3A subunit 1, partial [Nicotiana tabacum]
Sequence

MLSTTPILPLPAPPLDGNLGPTPPAQVVEEPKDDNMEENEEDTNKANNVSTSVATHTRTI
GIIYPPPDIRSIVDKTAQFVAKNGPEFEKRIVLNNAGNAKFNFLNASDPYHAYYQHRLAE
ARSQNQASGEQPTQPADQEAAPAPPTADGAEATARPDPSVQFRPVRRVLEPPEAEQYTVR
LPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFHFLKPTHSMFMFFTSLADA
YSKVLMPPKGLTDKLRKSAADMTTVLERCLHRLEWEKSQEQARQKAEDEIEQERLQMAMI
DWHDFVVVETIDFADDEDQXDLDLPPPMTLEEVIRRSKMPTLEEEEYVEPGKEVEMEMDE
EEVQLVEEGMRAATLQENGDVKSVETMAIPEEQDPPMRIVKNWKRPEERIPAERDPTKYV
VSPITGELIPINEMSEHMRISLIDPKYKEQKDRMFAKIKETTLAQDDEISRNIVGLARTR
PDIFGTTEEEVSNAVK

Transcript Sequence

Gene sequence data has not been registered.